PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.IDV43
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 124aa    MW: 13988.2 Da    PI: 10.3086
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.IDV43genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.3e-0541761555
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 ri +++  L+el+ +       K++ +++LekA+ Y+k Lq
  Araip.IDV43 41 RISERLKILQELVFNG-----SKVDLVTMLEKAISYVKFLQ 76
                 8999999999999995.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.89E-102483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.8652675IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-82882IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.12E-52880No hitNo description
SMARTSM003530.00233281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MTEKMKASKK QCTDESKMPK SNKSGTFKDP QSVAAKDTKE RISERLKILQ ELVFNGSKVD  60
LVTMLEKAIS YVKFLQLQVK VLAVNEFWPV QGGKISDISQ VKEAIDAILS SQRSEKQVQQ  120
PQSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193607.15e-72PREDICTED: putative transcription factor bHLH086 isoform X2
SwissprotQ9C7071e-45BH083_ARATH; Transcription factor bHLH83
TrEMBLA0A0B2PDS77e-54A0A0B2PDS7_GLYSO; Putative transcription factor bHLH086
TrEMBLI1MZD57e-54I1MZD5_SOYBN; Uncharacterized protein
STRINGGLYMA18G04420.12e-53(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49373253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.17e-47ROOT HAIR DEFECTIVE6